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ABOUT THIS RECORD

ID: MNEST003605
species: Zea mays
miRNA family: miR164c
source: miRNEST

Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CATGTGCCCTTCTTCTCCATC

miRNA*
 TGGAGAAGCAGGGCACGTGCA

mismatches: 1
bulges: 0
View larger
pre-miRNA
 GAGGATGGCGAGGTGCGCGAGGTGGAGAAGCAGGGCACGTGCATTCATTCGTTCCATCGACGGTCTGGCGCCGACTCACGCATCGCCGGCGCGGCGAGCT
GAGCGCGCGACACGGAAGCAGGTCCGCCGCGCCGGCGGCGCCCGCTGGCCGATCGACCGGCTAACTATAGCTAGCTCCAGGAAGCAAGCCAGGCCAGCCA
GCCAGCCGATCGATGCTTGCGCGTGCATGTGCCCTTCTTCTCCATCGGGCACGCCTCGCCTGCGC

dot-bracket secondary structure
......(((((((((.((..((((((((((.(((((((((((((.....(((..(((((((((.(((((..........((.((((((((((((((.(((
..((.((.....))...)).))).)))))))))))))).))..(((((((........((((.......(((..((...)).))).)))).)))))))..
)))))))).))))))...))).))))))))))))).))))))))))..)).))))))))).....


SIMILARITIES
miRBase zma-MIR164h: 3e-62

PMRD osa-miR164f: 6e-17

microPC miR164: 0.00001		UniProt no hits

RFAM MIR164: 0.0000000003		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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