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ABOUT THIS RECORD
ID:
MNEST003609
species:
Zea mays
miRNA family:
MIR394
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGGTGGGCATACTGCCAATGG
miRNA*
TTGGCATTCTGTCCACCTCC
mismatches:
3
bulges:
1
View larger
pre-miRNA
GCTTATCAAAGGGGCGCTTACTGAAGAGTTCC
TTGGCATTCTGTCCACCTCC
TCTCGCCGATCTTGCAGAAAGTTTACCAGTTCTGTTGCATTTTTTKTT
TTGG
AGGTGGGCATACTGCCAATGG
AGCTGTGCAGGCCTCCCTTTGTAAAGCCC
dot-bracket secondary structure
((((..((((((((.(((...((...((((((
((((((...(((((((((((
............(((((..((.(.....)..)).))))).........
..))
)))))))))...)))))).))
))))...))))).))))))))..))))..
SIMILARITIES
miRBase
zma-MIR394a
:
5e-44
PMRD
zma-miR394a
:
5e-44
microPC
miR394
:
0.0005
UniProt
no hits
RFAM
MIR394: 9e-40
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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