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ABOUT THIS RECORD

ID: MNEST003623
species: Zea mays
miRNA family: miR169o
source: miRNEST

Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGCAGGTCTTCTTGGCTAGAC

miRNA*
 TAGCCAAGAATGACTTGCCTA

mismatches: 2
bulges: 1
View larger
pre-miRNA
 TGCAGGCATGGATGAAGGTTAAAAAGAAAAAGAGGAGGGCGGCCTCACATGGAGATGGAGAGCCCCTTTTGGTAGCCAAGAATGACTTGCCTATGCACGC
CCTCTGTTGGTAGTTCCGTCCGGCAGCCATGGCGACGGTTGCACAAGGTGAGTTTTTGCGGCGTGGAGGATGCAATGCGGCTGCATCGGCAGGTCTTCTT
GGCTAGACAGAGGGCTCTCGTCCACCATGCCAGGCCTCCCTCTTCAAAATTTCCCTGATTTTTGCCCTCTGCACATG

dot-bracket secondary structure
((((((...((.(((((((((....((((..((((((((.(((((..(((((.((((.(((((((..((((.((((((((((.((((((((.(((((.((
(...(((((.....(((.((((...(((.(((.(((...(((.....))).))).))).))).)))))))..))))).)))))))).)))))))))))))
)))))..)))))))))))))))..)))))..))))).))))))))....))))..))))))))).))))))))....


SIMILARITIES
miRBase zma-MIR169o: 3e-65

PMRD sbi-miR169i: 2e-29

microPC no hits		UniProt no hits

RFAM MIR169_5: 2e-88		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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