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ABOUT THIS RECORD
ID:
MNEST003630
species:
Zea mays
miRNA family:
MIR1436
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATATTTTGGGACGGAGGGAGT
miRNA*
TCCCTCCGTCCCAAAATATTA
mismatches:
0
bulges:
0
View larger
pre-miRNA
TGATATTATATAC
TCCCTCCGTCCCAAAATATTA
GTCGTTTTAGCCATTGAATTTATGTCTATATTTAAATGAATGACAATGAATCTATATATAATATAA
AACACATACATTAAGTATTGTATGAATCTAGTAAAATGCTAAAACGACTA
ATATTTTGGGACGGAGGGAGT
ACAAAATAAC
dot-bracket secondary structure
..........(((
(((((((((((((((((((((
(((((((((((....((.(((((((.(((((.((.((..((....))..)).)).)))))))))))
)...((((((........))))))..)).........)))))))))))))
)))))))))))))))))))))
).........
SIMILARITIES
miRBase
tae-MIR1122
:
0.00004
PMRD
tmo-miR1122
:
0.0000006
microPC
miR1439
:
0.000009
UniProt
no hits
RFAM
MIR1122: 0.0000002
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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