ABOUT THIS RECORDspecies: Zea mays
miRNA family: MIR437
source: miRNEST
Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AAAGTTAGAGAAGTTTGACTT miRNA* GTCAAACATCTTTGACTTTGG mismatches: 1 bulges: 0 |
pre-miRNA
ACCCCCTCTTTCAAACCACAGGCCACTTTAGCTTTGTTCTAAGTCAAACATCTTTGACTTTGGCCAAATATTAAAAATACATCAACAAATGCACAAGGCA
CGTTTCATGGATAATTTAATGAAATCAATTTGATGTTGGAGCATTTTCTGTAAACCTTGTGAAAGTTAGAGAAGTTTGACTTATGAGATTGCTGAATTGA
TCTATAATTTGGAACGGAGAA
dot-bracket secondary structure
.....((((((((((....(((.((.((((((....(((((((((((((.(((((((((((.((....(((..(((((...((((((..(((.....)))
..((((((..........))))))(((...)))))))))...)))))..)))......)).))))))))))).)))))))))).)))...)))))).)).
)))....))))))..))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ACCCCCTCTTTCAAACCACAGGCCACTTTAGCTTTGTTCTAAGTCAAACATCTTTGACTTTGGCCAAATATTAAAAATACATCAACAAATGCACAAGGCA
CGTTTCATGGATAATTTAATGAAATCAATTTGATGTTGGAGCATTTTCTGTAAACCTTGTGAAAGTTAGAGAAGTTTGACTTATGAGATTGCTGAATTGA
TCTATAATTTGGAACGGAGAA
dot-bracket secondary structure
.....((((((((((....(((.((.((((((....(((((((((((((.(((((((((((.((....(((..(((((...((((((..(((.....)))
..((((((..........))))))(((...)))))))))...)))))..)))......)).))))))))))).)))))))))).)))...)))))).)).
)))....))))))..))))..
SIMILARITIES| miRBase sbi-MIR437u: 0.00000005 PMRD sbi-miR437u: 0.00000005 microPC miR437: 0.0002 | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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