ABOUT THIS RECORDspecies: Zea mays
miRNA family: MIR1122
source: miRNEST
Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TACTCCCTCCGTCCCAAATTA miRNA* GTTTGGGACAGGCGGAGTACT mismatches: 2 bulges: 0 |
pre-miRNA
TATATCTGCCTACTCCCTCCGTCCCAAATTATAAGTCGTTTTAGGTGCATAGAAAGCTATGCACCTAGAAAAGACAAAACCACTTATAGTTTGGGACAGG
CGGAGTACTTCTCAAA
dot-bracket secondary structure
..........((((((.((.((((((((((((((((.(((((((((((((((....))))))))))).........)))).)))))))))))))))).))
.)))))).........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
TATATCTGCCTACTCCCTCCGTCCCAAATTATAAGTCGTTTTAGGTGCATAGAAAGCTATGCACCTAGAAAAGACAAAACCACTTATAGTTTGGGACAGG
CGGAGTACTTCTCAAA
dot-bracket secondary structure
..........((((((.((.((((((((((((((((.(((((((((((((((....))))))))))).........)))).)))))))))))))))).))
.)))))).........
SIMILARITIES| miRBase no hits PMRD osa-miRf11705-akr: 0.00009 microPC miR1439: 0.00009 | UniProt no hits RFAM MIR1122: 0.0000001 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
