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ABOUT THIS RECORD

ID: MNEST003650
species: Zea mays
miRNA family: MIR172
source: miRNEST

Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AGAATCCTGATGATGCTGCAG

miRNA*
 GTAGTAGTCGGGAACTGCG

mismatches: 4
bulges: 2
View larger
pre-miRNA
 GAACGGGTTTGTAGTAGTCGGGAACTGCGCCGGCGGGTGAGACGGCAGGGGCATGCCGCCGTTGGCCCCGGCGGCGGTAGAGAATCCTGATGATGCTGCA
GAGTGGTG

dot-bracket secondary structure
.......((((((((((((((((((((((((((..(((..((((((.((......)))))))).)))))))).)))))......)))))))..)))))))
))......


SIMILARITIES
miRBase bdi-MIR172d: 0.00002

PMRD sof-miR172a: 0.0000000003

microPC miR172: 0.0000003		UniProt no hits

RFAM mir-172: 0.0004		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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