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ABOUT THIS RECORD
ID:
MNEST003656
species:
Zea mays
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTACTCTCTCCGTCCCAATAT
miRNA*
ATTGGGACGGAGGGAGTAGTA
mismatches:
0
bulges:
0
View larger
pre-miRNA
GCTATAGATAATGTT
TTACTCTCTCCGTCCCAATAT
ATAGCAACCTAGGATGGGACCCATCCTAGGACTTTGAATCTGGACCCATCCTAGGACTTCGAAG
TCCTAGGATGGTCTAATGGTCTAATCCCATCCTAGGTTGTTGCAT
ATTGGGACGGAGGGAGTAGTA
AATTAGTTCTGA
dot-bracket secondary structure
....((((((((...
(((((((((((((((((((((
.((((((((((((((((((.((((((((((((((((((((((((....)))..))).)))))))
))))))))))).............)))))))))))))))))).))
)))))))))))))))))))..
.))))..)))).
SIMILARITIES
miRBase
ssp-MIR1128
:
0.0006
PMRD
osa-miRf10814-akr
:
0.000000002
microPC
miR1436
:
0.0006
UniProt
no hits
RFAM
MIR1122: 3e-83
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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