miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST003657
species:
Zea mays
miRNA family:
MIR1436
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCATATTGGGACGGAGGGAGT
miRNA*
TCTCTCCGTCCCAATATATAG
mismatches:
1
bulges:
0
View larger
pre-miRNA
CTATAGATAATGTTTTAC
TCTCTCCGTCCCAATATATAG
CAACCTAGGATGGGACCCATCCTAGGACTTTGAATCTGGACCCATCCTAGGACTTCGAAGT
CCTAGGATGGTCTAATGGTCTAATCCCATCCTAGGTTGTT
GCATATTGGGACGGAGGGAGT
AGTAAATTAGTTCTG
dot-bracket secondary structure
...((((((((...((((
(((((((((((((((((.(((
(((((((((((((((.((((((((((((((((((((((((....)))..))).))))))))
)))))))))).............)))))))))))))))))
).)))))))))))))))))))
))...))))..))))
SIMILARITIES
miRBase
ssp-MIR1128
:
0.0005
PMRD
osa-miRf10814-akr
:
0.000000002
microPC
miR1436
:
0.0005
UniProt
no hits
RFAM
MIR1122: 3e-83
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record