ABOUT THIS RECORDspecies: Zea mays
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATACTATCTCCGTCCCAAAAT miRNA* TTTAGGACCGAGGGAGTAGGT mismatches: 4 bulges: 0 |
pre-miRNA
AAAACATACTATCTCCGTCCCAAAATATAGTTCTTTCTAGCCTATTTTTTTCCGATCCATATTAATAAACGTATAAATAGTGTAGAATGAATTATATTTT
AGGACCGAGGGAGTAGGTCT
dot-bracket secondary structure
...((.((((.((((.((((.((((((((((((.(((((..((((((.....((...............))...))))))..))))).))))))))))))
.)))).)))).)))).))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AAAACATACTATCTCCGTCCCAAAATATAGTTCTTTCTAGCCTATTTTTTTCCGATCCATATTAATAAACGTATAAATAGTGTAGAATGAATTATATTTT
AGGACCGAGGGAGTAGGTCT
dot-bracket secondary structure
...((.((((.((((.((((.((((((((((((.(((((..((((((.....((...............))...))))))..))))).))))))))))))
.)))).)))).)))).))..
SIMILARITIES| miRBase osa-MIR1439: 0.00009 PMRD osa-miRf10151-akr: 0.00009 microPC no hits | UniProt no hits RFAM MIR1122: 0.000002 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
