miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST003663
species: Zea mays
miRNA family: MIR167
source: miRNEST

Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGAAGCTGCCAGCATGATCTG

miRNA*
 GGTCGTGCTGTAGTTTCATC

mismatches: 0
bulges: 1
View larger
pre-miRNA
 ATGTGGTGGTGCACCACGAGTTGGTGAAGCTGCCAGCATGATCTGGTTATGATGGGGGGGGTATATGTAAAATGGATGTAATCTATACTACTACCGGCCC
CTGTCACTCTCTCTCTCTCCCCCGTCCCTGAGTGTCATATATGGATCGACGAATCCAAGATGAGAGGGGAGGGGAGAGAGAGAGAGGGTAATTAATGAGC
ACCAGGACCAGGTCGTGCTGTAGTTTCATCTGCTGGGGGCCGCACATCAAA

dot-bracket secondary structure
(((((.((((...((...(((.(((((((((((.((((((((((((((.(((((((((.((((...(((..((((((...))))))..)))))))..)))
))))))((((((((((((((((..(((((.....((((...(((((......)))))..))))..)))))))))))))))))))))(((...........
)))..))))))))))))))))))))))))).))).)).)))))))))....


SIMILARITIES
miRBase zma-MIR167g: 1e-42

PMRD zma-miR167g: 1e-42

microPC miR167: 0.0000000000002		UniProt no hits

RFAM MIR167_1: 9e-38		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;