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ABOUT THIS RECORD
ID:
MNEST003685
species:
Zea mays
miRNA family:
MIRf34
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCTGGGACGGAGGGAGTACTC
miRNA*
ATACTCCCTCCGTCCCAGTAT
mismatches:
4
bulges:
0
View larger
pre-miRNA
ATTTTTGTGAC
ATACTCCCTCCGTCCCAGTAT
ATAAGGCATAACCACCTCTGGATCAAAGACCAAGAAATGCATTTAATTCTCTCTATATCACTGTATCG
ATGTATGTGTGCATAGAGAGAGCACGCCTTATATTGTGGGACAAGAACAAAAAGTGGTTACGCCTTATAT
TCTGGGACGGAGGGAGTACTC
CCTCTGTA
dot-bracket secondary structure
...........
.(((((((((((((((((.((
(((((((.(((((((..............(((.((.(((.......((((((((((..((((((((..
..))))).))).)))))))))).......))).)).)))..............))))))).)))))))))
.)))))))))))))))))...
........
SIMILARITIES
miRBase
osa-MIR818d
:
0.000003
PMRD
osa-miRf10710-akr
:
0.0000006
microPC
miR1439
:
0.0002
UniProt
no hits
RFAM
MIR806: 0.000003
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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