ABOUT THIS RECORDspecies: Zea mays
miRNA family: MIR444
source: miRNEST
Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTGCTGCCTCAAGCTTCCTGC miRNA* AGCAAGCTCGAGACAACAACT mismatches: 4 bulges: 0 |
pre-miRNA
TTGGGGGCAGCAAGCTCGAGACAACAACTGCATAGCATGCAAGAGCTTGTTGGTTGAGGGTCATACCGATGGTGCTCTTGCAAGTTATGCAGTTGCTGCC
TCAAGCTTCCTGCCTCCC
dot-bracket secondary structure
..((((((((.(((((.(((.((.((((((((((((.(((((((((.((((((((((...))).)))))))..))))))))).)))))))))))).)).)
)).))))).)))))))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTGGGGGCAGCAAGCTCGAGACAACAACTGCATAGCATGCAAGAGCTTGTTGGTTGAGGGTCATACCGATGGTGCTCTTGCAAGTTATGCAGTTGCTGCC
TCAAGCTTCCTGCCTCCC
dot-bracket secondary structure
..((((((((.(((((.(((.((.((((((((((((.(((((((((.((((((((((...))).)))))))..))))))))).)))))))))))).)).)
)).))))).)))))))).
SIMILARITIES| miRBase osa-MIR444a: 2e-21 PMRD tae-miR444: 0.0000000000004 microPC miR444: 0.0000000004 | UniProt no hits RFAM MIR444: 2e-61 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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