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ABOUT THIS RECORD
ID:
MNEST003698
species:
Zea mays
miRNA family:
MIR444
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCAGTTGCTGCCTCAAGCTT
miRNA*
GCTAGAGGCCGGCAACTGCATA
mismatches:
1
bulges:
1
View larger
pre-miRNA
GCATTTGGGCGGGGGCAGCAA
GCTAGAGGCCGGCAACTGCATA
ACTTGCGATAAACTTGTTGGACCATGGTGTGCTGATGATTTTACCGCAAGTTA
TGCA
GTTGCTGCCTCAAGCTT
GCTGCCTCCCTTTGCCAA
dot-bracket secondary structure
(((...(((.(((((((((((
(((.(((((.((((((((((((
(((((((.((((.(((((((..((...))..))))))).)))).)))))))))
))))
))))))))))).)))))
)))))))))))))))...
SIMILARITIES
miRBase
osa-MIR444e
:
8e-21
PMRD
osa-miR444e
:
8e-21
microPC
miR444
:
0.0000000004
UniProt
no hits
RFAM
MIR444: 3e-70
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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