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ABOUT THIS RECORD
ID:
MNEST003701
species:
Zea mays
miRNA family:
MIR444
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGTTGCCTCAAGCTTGCTGCC
miRNA*
CACCAAGCATGAGGCAGGAAC
mismatches:
3
bulges:
0
View larger
pre-miRNA
GGTGG
CACCAAGCATGAGGCAGGAAC
TGCATTATTTGCAAGAAAGTCACAAGCTCATTCCACTCTGATTCTCTAAACTTTGGAGGTCTCTTACACCTAGG
CCTGAAAGCTCCTCTCCCATTATTTGCCTACAACATTGGAAAAGAGTTTCTCACATTATCTTAAAATCCTTTGCAAGATCATACTTGTGGCTTTCTTGCA
AGTTGTGCAGT
TGTTGCCTCAAGCTTGCTGCC
TC
dot-bracket secondary structure
...((
((.(((((.((((((((.(((
(((((.((((((((((((((((((((((...........((.(((((((...)))))))..)).........))
).(((((((((...(((.((...(((....))).)).)))...)))))).))).((.(((((.(((...)))..))))).))..))))))))))))))))
))).)))))))
).)))))))).))))).))))
..
SIMILARITIES
miRBase
ssp-MIR444b
:
2e-23
PMRD
osa-miR444f
:
4e-18
microPC
miR444
:
8e-87
UniProt
sp|Q6Z6W2|MAD57_ORYSJ: 0.000000002
RFAM
MIR444: 2e-115
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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