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ABOUT THIS RECORD
ID:
MNEST003705
species:
Zea mays
miRNA family:
miR166d
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGAATGTTGTCTGGTTCAAGG
miRNA*
TCGGACCAGGCTTCATTCCCC
mismatches:
3
bulges:
0
View larger
pre-miRNA
GAGAAAGATGTGAAGCTATTTGCTTCTGAGT
GGAATGTTGTCTGGTTCAAGG
TCTTTTGCTTTGTGATCCATGTGTGTAGAGCTTCTAAGTATTCCTTGG
ATCTGCAAGATC
TCGGACCAGGCTTCATTCCCC
TCAGCAATAGCTTCAAAAATGATATCGT
dot-bracket secondary structure
((........((((((((((.((...((((.
((((((..(((((((((.(((
(((..(((.....((((((.((((.((((...)))).))))....)))
))).))))))))
).)))))))))..)))))).)
))))))))))))))).........))..
SIMILARITIES
miRBase
zma-MIR166d
:
9e-52
PMRD
zma-miR166d
:
9e-52
microPC
miR166
:
0.0000000000001
UniProt
no hits
RFAM
mir-166: 7e-56
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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