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ABOUT THIS RECORD
ID:
MNEST003712
species:
Zea mays
miRNA family:
MIRf181
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATGTGCCCATCTTCTCCACCG
miRNA*
GTGGAGAAGCAGGGCACGTGC
mismatches:
2
bulges:
0
View larger
pre-miRNA
CACTTGAGAGATGTGTGTGTGGTAGACGGTGGCTGTGCGTG
GTGGAGAAGCAGGGCACGTGC
ATTACCATCCAATGCCGCCGGGTGGGTGGGTGGAATGG
ATGGATGGTTCTTG
ATGTGCCCATCTTCTCCACCG
AGCACGAACTGTCTTGGATCCGCGCGCGCGTGCCGTAC
dot-bracket secondary structure
..........((((((((((((.(((((((...(((((.((
(((((((((..((((((((.(
(..((((((((...(((((.........))))).....
.))))))))...))
))))))))..)))))))))))
.))))).))))))).....)))))))))))).......
SIMILARITIES
miRBase
zma-MIR164b
:
2e-68
PMRD
zma-miR164b
:
2e-68
microPC
miR164
:
9e-46
UniProt
no hits
RFAM
MIR164: 5e-17
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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