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ABOUT THIS RECORD

ID: MNEST003715
species: Zea mays
miRNA family: MIR396
source: miRNEST

Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCCCACAGCTTTATTGAACTG

miRNA*
 GTTCAAGAAAGCTGTGGAAGA

mismatches: 2
bulges: 0
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pre-miRNA
 TGCTGGCCTCTCTTTCCAGTTTCCCACAGCTTTATTGAACTGCATGCACCTGCTGATGCGGGTGGAGGAGTTGAAACTGCCGCTCCTCTGAAAGATGCAG
TTCAAGAAAGCTGTGGAAGATCACAAAGAAGGCCATCT

dot-bracket secondary structure
...((((((.(((((...((((.((((((((((.(((((((((((..((((((....))))))((((((((..........)))))))).....))))))
))))).)))))))))).))))...)))))))))))...


SIMILARITIES
miRBase zma-MIR396b: 9e-64

PMRD zma-miR396b: 9e-64

microPC miR396: 0.000000002		UniProt no hits

RFAM MIR396: 9e-18		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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