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ABOUT THIS RECORD

ID: MNEST003718
species: Zea mays
miRNA family: MIR408
source: miRNEST

Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCACTGCCTCTTCCCTGGCT

miRNA*
ACAGGCATAGGCAGAGCATG

mismatches: 5
bulges: 1

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pre-miRNA
GGGGGTTGGTTTTAATTTGAGACAGGCATAGGCAGAGCATGGGATGGGGCCATCAACAAAGTGGAGGGACTAGCTTGTGAGTGCAGAAAGAAGGTGCCAG
TGGCTCCCTGGTGAAACGATGATGGCAGTGTTGTTGCTCCCTCCCCTGCACTGCCTCTTCCCTGGCTCCTCCGATCCCCCACCGT


dot-bracket secondary structure
(((((((((.........(((.((((...((((((.(((.((((.(((((...(((((..((..(((((...(((..((.((((.........)))))).
.)))))))).((.........)).))..)))))..))))).)))).))).))))))....)))).)))..)))))))))......



SIMILARITIES
miRBase zma-MIR408: 2e-53

PMRD zma-miR408: 2e-53

microPC miR408: 0.0001
UniProt no hits

RFAM MIR408: 6e-66
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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