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ABOUT THIS RECORD
ID:
MNEST003731
species:
Zea mays
miRNA family:
miR156f
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCTCACTCTCTATCTGTCAGC
miRNA*
TTGACAGAAGAGAGTGAGCAC
mismatches:
0
bulges:
2
View larger
pre-miRNA
AAGGCAAACAGTAGATGGGTTTTTGAAGGT
TTGACAGAAGAGAGTGAGCAC
ACACGGTGGTTTCTTACCATGAGTGTCATGCTAGGAGCTGTGCGT
GCTC
ACTCTCTATCTGTCAGC
CACTCATCAAGCCCATCTGTCTTAGCT
dot-bracket secondary structure
..(((.((...(((((((((((.(((.(((
(.(((((((((((((((((((
.((((((....(((((.(((((...))))).))))))))))).))
))))
))))))).)))))))))
)..)))..)))))))))))..)).)))
SIMILARITIES
miRBase
zma-MIR156b
:
1e-56
PMRD
zma-miR156b
:
1e-56
microPC
miR156
:
3e-36
UniProt
no hits
RFAM
mir-156: 1e-32
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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