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ABOUT THIS RECORD
ID:
MNEST003745
species:
Zea mays
miRNA family:
MIR444
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGTTGTCTCAAGCTTGCTGCC
miRNA*
TGACGAGCTAGAGGCAGCAAC
mismatches:
2
bulges:
0
View larger
pre-miRNA
TTGATGCAAGGAGCGG
TGACGAGCTAGAGGCAGCAAC
TGCATATCTTGCAAGAAAATTGGTTTTCGAACCATACCGATAATTTTCTTGCAAGTTGTGCAG
T
TGTTGTCTCAAGCTTGCTGCC
TCCCTTTGCCAAA
dot-bracket secondary structure
.....((((((...((
((.((((((.(((((((((((
((((((.((((((((((((((((((....)))))........))))))))))))).)))))))
)
))))))))).)))))).))))
...))))))....
SIMILARITIES
miRBase
ssp-MIR444c
:
3e-54
PMRD
pvi-miR444
:
7e-52
microPC
miR444
:
2e-52
UniProt
sp|Q6EP49|MAD27_ORYSJ: 0.0003
RFAM
MIR444: 6e-65
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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