miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST003753
species:
Zea mays
miRNA family:
MIR159
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTGGATTGAAGGGAGCTCTG
miRNA*
GAGCTCCTATCATTCCAATGA
mismatches:
3
bulges:
0
View larger
pre-miRNA
GTTTGAAGCG
GAGCTCCTATCATTCCAATGA
AGGGTCGTTCCGAAGGGCTGGATCCGCTGCTCGTTCATGGTTCCCACTATCCTATCTCATCATGTGTAT
ATATGTAATCCATGTGGGAGGGTTTCTCTCGTCTTTGAGATAGGCTTGTGGTTTGCATGACCGAGGAGCTGCACCGCCCCCTTGCTGGCCGCTC
TTTGGA
TTGAAGGGAGCTCTG
CATCCTG
dot-bracket secondary structure
....((.(((
((((((((.(((.(((((.((
..(((((...(((.(((.(((....(((.((((.(((((....((((...((((((((((((((((.((
.......)).)))))))(((((...))))).....)))))))))...))))....))))).)))).)))....))).))).))).)))))..))
.)))))
.))).))))))))))
).))...
SIMILARITIES
miRBase
zma-MIR159a
:
1e-119
PMRD
zma-miR159a
:
1e-119
microPC
miR319
:
3e-21
UniProt
no hits
RFAM
MIR159: 2e-103
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record