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ABOUT THIS RECORD

ID: MNEST003759
species: Zea mays
miRNA family: MIR159
source: miRNEST

Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTTGGATTGAAGGGAGCTCTG

miRNA*
 GAGCTCCTATCATTCCAATGAAG

mismatches: 2
bulges: 2
View larger
pre-miRNA
 GTTTGAAGCGGAGCTCCTATCATTCCAATGAAGGGTCGTACCGAAGGGCCGGTTCCGCTGCTCGTTCATGGTTCCCACTATCCTATCTCATCATGTGTAT
ATATGTATGTATTCCATGGGGGGAGGGTTTCTCTCGTCTTTGAGATAGGCTTGTGGTTTGCATGACCGAGGAGCTGCACCGCCCCTTTGCTGCCGCTCTT
TTGGATTGAAGGGAGCTCTGCATCCTG

dot-bracket secondary structure
....((.(((((((((((.(((.((((..(((((((.(((.(((((((.((((...(((.((((.(((((....((((...((((((((((((((.((((
((....))))))..))))).((((((...)))))).....)))))))))...))))....))))).)))).)))...)))).))))))).))).))))))
))))).))).))))))))))).))...


SIMILARITIES
miRBase zma-MIR159a: 6e-94

PMRD zma-miR159a: 6e-94

microPC miR319: 0.0000000000002		UniProt no hits

RFAM MIR159: 5e-110		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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