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ABOUT THIS RECORD
ID:
MNEST003768
species:
Zea mays
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTACTCCCTCCGTCCCAGTTT
miRNA*
TTTGAAGCGGAGGGAGTATAA
mismatches:
4
bulges:
0
View larger
pre-miRNA
TTATTAAGTG
TTACTCCCTCCGTCCCAGTTT
TTAATTCATTTGACTTTTTCAATCCTAACTTTGAGCACTCGTTTTATTCAAAACATTTGTAAAAAACAA
AAAAATCATTGTGATTTTGTTTATTTCAAATGTACTTTACATATGTCTTTTTTTCCCCATTTTTTCATGATTTTTTTGAATAAGACGACTGGTCAAAGTC
GAGGTTGAAAAAGTCAAACTAATTATAA
TTTGAAGCGGAGGGAGTATAA
TAAATGG
dot-bracket secondary structure
.......((.
.((((((((((((..(((.((
.(((((..((((((((((((((.(((.(((((((.((.(((((((((((((((...((((.(((((..(
(((((.((((((((....((.((((...)))).)).))))).)))...))))))......))))).))))...))))))))))))))).)).))))))).
.)))))))))))))))))..))))).))
.)))..))))))))))))..)
)......
SIMILARITIES
miRBase
osa-MIR818e
:
0.00001
PMRD
osa-miR818e
:
0.00001
microPC
no hits
UniProt
no hits
RFAM
MIR806: 0.00006
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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