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ABOUT THIS RECORD
ID:
MNEST003778
species:
Zea mays
miRNA family:
MIR2275
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGGATTAGAGGGACTTGAACT
miRNA*
TTCAGTTTCCTCTAATATCTCA
mismatches:
1
bulges:
1
View larger
pre-miRNA
ACCATGACGAAGAGAGATGTTGATATGTGTCATTTGAAGTG
AGGATTAGAGGGACTTGAACT
ATTCATAGCTTGTTCGGTTATGTCTGGATCGAAGAGGG
TTGGAAGGTCCTTTCTAGTTAAAATTAAATAGAAAGAGATTGAATCCCTTTAACCTCCTATCCAGATGTGACCAAACAAACTCTCATTGGGAGTAAAAGG
GG
TTCAGTTTCCTCTAATATCTCA
TCTTAAATGGCCCATCATCTCCTGAGATGTTTGTCTGC
dot-bracket secondary structure
..........((.((((((.....(((.(((((((((.(((
(((((((((((((.(((((((
.((......(((((.((((((((((((((...((.(((
(((((.(((((((((((.(((....))).))))))).))))...)))....))))).)))))))))))))))).)))))((((((...))))))..))..
))
))))).)))))))))).)))))
).))))))))).))))))))))).((((....))))..
SIMILARITIES
miRBase
zma-MIR2275c
:
7e-131
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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