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ABOUT THIS RECORD
ID:
MNEST003783
species:
Zea mays
miRNA family:
MIRf406
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTCTCTAGAGAAGCCAGAGCC
miRNA*
CCCTGGCTCTTTGATGGCTC
mismatches:
4
bulges:
1
View larger
pre-miRNA
AGCTTCTTGGT
TTCTCTAGAGAAGCCAGAGCC
GTTTTGTAATTCATTTGGTAAAACAGCTTCTCACGAGGAGACGGTGGCAGAGACTGTAATTTCGTGAA
ACATTATTGTGTGCCGGATAGAAGGAGCCGGTAGAAGTTTGTTTTCTCGTGCTTCGGCTCCTAATAGCAAAACGG
CCCTGGCTCTTTGATGGCTC
TCCGT
GAG
dot-bracket secondary structure
....((.(((.
.((..((((((.(((((.(((
(((((((.(((.((((((((..((((....((((((((..(((((.......)))))..)))))))).
......)))).))))))))...(((((((((.(((((.....)))))......)))))))))))).)))))))))
).)))))))))))..))...
.))).
)).
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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