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ABOUT THIS RECORD

ID: MNEST003855
species: Oryza sativa
miRNA family: MIRf34
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATGACTTATATTGTGAAACGA

miRNA*
 GTTTCACAATGTAAGTCATTC

mismatches: 1
bulges: 0
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pre-miRNA
 AGTACTTCCTCCGTTTCACAATGTAAGTCATTCTAGTATTCACCATATTTATATTGATATTGATGAATTTAAATAGATATATGTCTAGATTCATTAATAT
AAATATGAATGTGAAAAATGCTAGAATGACTTATATTGTGAAACGAAGGGAGTAG

dot-bracket secondary structure
..((((((((.(((((((((((((((((((((((((((((...((((((((((((.(((((((((((((((.(((......))).)))))))))))))))
.))))))))))))...))))))))))))))))))))))))))))).)))))))).


SIMILARITIES
miRBase osa-MIR809d: 7e-37

PMRD osa-miR809d: 7e-37

microPC miR809: 1e-50		UniProt sp|Q6K1U0|P2C17_ORYSJ: 0.0003

RFAM MIR1122: 1e-38		most similar mature miRNAs

Identical with: miR809 from microPC (MNEST045839)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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