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ABOUT THIS RECORD

ID: MNEST003894
species: Oryza sativa
miRNA family: MIRf34
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTACATTGTGAAACAGAGGGA

miRNA*
 CCTCCGTTTCACAATGTAAGT

mismatches: 1
bulges: 0
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pre-miRNA
 TATGTAGTACTCCCTCCGTTTCACAATGTAAGTCATTTTAGCATTTTTCACATTCATATTGATGTTAATAAATCTAGATAGATATATATATGTCTAGATT
CATTAACATCAATATAAATATGAAAAATACTAAAATGACTTACATTGTGAAACAGAGGGAGTACGTACG

dot-bracket secondary structure
...(((((((((((((.((((((((((((((((((((((((.((((((((.(((.((((((((((((((.((((((((((..........))))))))))
.)))))))))))))).))).)))))))).)))))))))))))))))))))))).)))))))))).))).


SIMILARITIES
miRBase osa-MIR809a: 2e-52

PMRD osa-miR809a: 2e-52

microPC miR809: 4e-23		UniProt sp|Q6K1U0|P2C17_ORYSJ: 0.00005

RFAM MIR1122: 3e-49		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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