ABOUT THIS RECORDspecies: Oryza sativa
miRNA family: MIRf1628
source: miRNEST
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTAGTCGCTGACGAGTGGGGC miRNA* TCCATGCGTGCAGCTACTGGA mismatches: 3 bulges: 1 |
pre-miRNA
ATTTAGTCGCTGACGAGTGGGGCCCCTCCATGCGTGCAGCTACTGGA
dot-bracket secondary structure
.((((((.(((((((.((((((...)))))).))).)))).))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
ATTTAGTCGCTGACGAGTGGGGCCCCTCCATGCGTGCAGCTACTGGA
dot-bracket secondary structure
.((((((.(((((((.((((((...)))))).))).)))).))))))
SIMILARITIES| miRBase no hits PMRD osa-miRf11343-akr: 0.0004 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
