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ABOUT THIS RECORD

ID: MNEST003901
species: Oryza sativa
miRNA family: MIR441
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAGCATCAATATAAATGTGAG

miRNA*
 CATATTCATATTGATATTAAT

mismatches: 2
bulges: 0
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pre-miRNA
 CACAGTCCTCTGTTTCATAATATAAGTCATTCTAACATTTTTCATATTCATATTGATATTAATGAATCTAGATAGATATATATGTCTAGATTCATTAGCA
TCAATATAAATGTGAGAAATTTTAGAATGACTTACATTGTAAAACGGAGGGAGTA

dot-bracket secondary structure
.((..((((((((((.(((((.(((((((((((((.((((((((((((.((((((((.((((((((((((((((........)))))))))))))))).)
))))))).)))))))))))).))))))))))))).))))).)))))))))).)).


SIMILARITIES
miRBase osa-MIR441c: 1e-50

PMRD osa-miR441c: 1e-50

microPC miR809: 9e-52		UniProt no hits

RFAM MIR1122: 4e-54		most similar mature miRNAs

Identical with: miR809 from microPC (MNEST045708)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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