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ABOUT THIS RECORD

ID: MNEST003939
species: Oryza sativa
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TACTTCCTCCGTTTCATATTA

miRNA*
 TGCCGAGGCGCGGGGGGTGCT

mismatches: 5
bulges: 0
View larger
pre-miRNA
 GTGACATCCACAATGCCTCTTCCATTGAGATTTAATTTGTTTGTCGCAGTAGCGTAAGTAGTACTTCCTCCGTTTCATATTATAAGAATTTTTAGCATTG
CCAATATTATATATATATATGTTAATGAATATATATATATATATATATGNNTAATGAATATATATATANTATATATATATGNGNGCNCGCNTATNTNTAN
NTANTGGCCCGGCGCAAGTNTCTCATATGCCGAGGCGCGGGGGGTGCTCCTCCCGCGCCCGCGGCGAACAAATTATATCACTCTGGGAGGGGGCCTTG

dot-bracket secondary structure
(((.....)))...(((((((((...(((((.(((((((((((((((....(((..((.((((((((((.((((((....(((.(((..(((..((...(
(((.((...((.............(((.(((((((..(((((((((((.........))))))))))).))))))).))).................)).
.)).))))...))..)))..))).)))....)))))).)))))))))).))..)))....))))))))))))))).)))..))..)))))))))....


SIMILARITIES
miRBase osa-MIR819i: 0.00000000002

PMRD osa-miR819i: 0.00000000002

microPC miR1120: 0.00006		UniProt no hits

RFAM MIR1122: 0.000000000005		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
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