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ABOUT THIS RECORD
ID:
MNEST003952
species:
Oryza sativa
miRNA family:
MIRf528
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CAGATTCGTTGTATTAGGAAA
miRNA*
CCCTAGTATAACGAATNTAGGC
mismatches:
3
bulges:
1
View larger
pre-miRNA
CCATAAAAAACCAACCTGGTATTGGAGGTGATATT
CCCTAGTATAACGAATNTAGGC
AACCTTNTGTT
CAGATTCGTTGTATTAGGAAA
TATCNCCTCCA
ATAGTAGGTTGATTTTTTGTGGGNCGAA
dot-bracket secondary structure
((((((((((.(((((((.(((((((((.((((((
.(((((((((((((((...((.
.((.....)))
)..))))))))))))))).))
)))).))))))
))).))))))).))))))))))......
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
MIR1122: 4e-60
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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