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ABOUT THIS RECORD
ID:
MNEST003966
species:
Oryza sativa
miRNA family:
miR1847.1
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCAGTTTGCAGTTGTGTCAC
miRNA*
GACGCAACTGCAAAATGTATA
mismatches:
1
bulges:
0
View larger
pre-miRNA
ATCTCTCTCTG
TGCAGTTTGCAGTTGTGTCAC
TGATATATGAGCCATAGCAAAGTGGGTCCACATGTTAGT
GACGCAACTGCAAAATGTATA
AAGTCAGA
dot-bracket secondary structure
.(((..((.((
((((.((((((((((((((((
((((((.((.(((...((...)).))).)).))))))))
)))))))))))))).))))))
.))..)))
SIMILARITIES
miRBase
osa-MIR1847
:
0.0000000003
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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