ABOUT THIS RECORDspecies: Oryza sativa
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAAGACTTTNTAGCATTGTCC miRNA* GCAATGCCATAAAGTCTTACA mismatches: 3 bulges: 0 |
pre-miRNA
ANATATGTAATAACCCCTCCGTTNCATATTATAAGACTTTNTAGCATTGTCCACATTTATATAGATGTGGGCAATGCCATAAAGTCTTACAATATGAAAA
CGGAGGAAGTCTTGTAACT
dot-bracket secondary structure
...............((((((((.((((((.(((((((((...(((((((((((((((....)))))))))))))))...))))))))).))))))..))
)))))).............
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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ANATATGTAATAACCCCTCCGTTNCATATTATAAGACTTTNTAGCATTGTCCACATTTATATAGATGTGGGCAATGCCATAAAGTCTTACAATATGAAAA
CGGAGGAAGTCTTGTAACT
dot-bracket secondary structure
...............((((((((.((((((.(((((((((...(((((((((((((((....)))))))))))))))...))))))))).))))))..))
)))))).............
SIMILARITIES| miRBase osa-MIR819a: 0.000000000000002 PMRD osa-miR819a: 0.000000000000002 microPC miR1130: 0.000000000002 | UniProt no hits RFAM MIR1122: 3e-23 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record
