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ABOUT THIS RECORD

ID: MNEST003986
species: Oryza sativa
miRNA family: MIRf34
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GTCTTATAACCTGAAACGGAG

miRNA*
 TTGTTTTGGGTTGAAAATGT

mismatches: 2
bulges: 1
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pre-miRNA
 TTAGTTTTATCAAATCAATAATTGAATATATTTTCATAATAAATTTGTTTTGGGTTGAAAATGTTACTACTTTTTTCTACAAACTTGGTCAAACTTAAAG
CAGTTTGACTTTGACCAAAGTTAAAACGTCTTATAACCTGAAACGGAGGAAGTAACAGTTATGAACTAAAAAGTGATAAATCCATGTTA

dot-bracket secondary structure
.....(((((((.....(((((((....(((((((........((((((((((((((((.(((((...(((((..((.........(((((((((.....
.)))))))))..))..)))))...))))).)).))))))))))))))))))))).)))))))...........))))))).........


SIMILARITIES
miRBase osa-MIR819d: 0.00000004

PMRD osa-miR819d: 0.00000004

microPC miR437: 0.000002		UniProt no hits

RFAM MIR1122: 0.0000000007		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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