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ABOUT THIS RECORD

ID: MNEST003990
species: Oryza sativa
miRNA family: MIRf34
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATCTTATAACCTGAAACAGAG

miRNA*
TCGTTTCATATTATAAGGTTT

mismatches: 3
bulges: 0

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pre-miRNA
AGTTTGCTTCCCTGGAATTTCCTTCGTTTCATATTATAAGGTTTCTAGCATTACTCATATTCACATATATATATATATGATAATATTCTAGATTCATTAT
CATATATATGATTATAGGTAATGCTAGAAAATCTTATAACCTGAAACAGAGGGAGTATATATAATTCGGTA


dot-bracket secondary structure
...........(((((((((((((.((((((..((((((((((((((((((((((.(((.(((........(((((((((((((...........)))))
))))))))))).))).))))))))))).)))))))))))..)))))).))))))))........)))))..



SIMILARITIES
miRBase osa-MIR819b: 0.000000002

PMRD osa-miR819b: 0.000000002

microPC miR819: 0.0001
UniProt no hits

RFAM MIR1122: 0.0000000002
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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