ABOUT THIS RECORDspecies: Oryza sativa
miRNA family: MIRf528
source: miRNEST
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTACTAGGATATGTCACATCA miRNA* ATGTGACACATTCTAACACTA mismatches: 4 bulges: 0 |
pre-miRNA
GATTCTAGATGGATGTGACACATTCTAACACTACAAATCTGTACAGCGAACCTGTCCAGATTCATAGTACTAGGATATGTCACATCAACCCAAAAT
dot-bracket secondary structure
...........(((((((((.((((((..((((..((((((.((((.....)))).))))))..))))..)))))).)))))))))..........
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GATTCTAGATGGATGTGACACATTCTAACACTACAAATCTGTACAGCGAACCTGTCCAGATTCATAGTACTAGGATATGTCACATCAACCCAAAAT
dot-bracket secondary structure
...........(((((((((.((((((..((((..((((((.((((.....)))).))))))..))))..)))))).)))))))))..........
SIMILARITIES| miRBase osa-MIR818a: 0.00000002 PMRD osa-miRf10400-akr: 0.00000000000002 microPC miR816: 0.00002 | UniProt no hits RFAM MIR1122: 0.000000000001 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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