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ABOUT THIS RECORD

ID: MNEST004034
species: Oryza sativa
miRNA family: MIR169
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAGCCAAGAATGGCTTGCCTA

miRNA*
 GTGAGCCTTCATGGCTAAG

mismatches: 2
bulges: 1
View larger
pre-miRNA
 TAAACTTGTGAGGAGGGTAGCCTTACATGGAGATGAGGAGATTGCCTCTGTTAGCCAAGAATGGCTTGCCTATCTCCACTATTTGGTTCATCACTGGAAC
ACACTTGGGGTTCTCCGATGGTGGATGAAATATGGAAGATGGTGAGCCTTCATGGCTAAGAGAGTGATTCTCATCCCCCATGCTAGGCTGTATCCCTCTT
TCTAGCTC

dot-bracket secondary structure
.....(((.((((((((((((((..(((((.((((((((......((((.(((((((.(((.((((((((.(((((((.(((((.((((((((.((((..
((.......))..)))).)))))))).)))))))).))))))))))))))).))))))).))))...))))))))..)))))..))))))...)))))))
).)))...


SIMILARITIES
miRBase osa-MIR1430: 6e-72

PMRD osa-miR1430: 6e-72

microPC miR1430: 1e-57		UniProt no hits

RFAM no hits		most similar mature miRNAs

Identical with: miR1430 from microPC (MNEST046226)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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