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ABOUT THIS RECORD
ID:
MNEST004089
species:
Oryza sativa
miRNA family:
MIRf34
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AATGTGGGCAATGCTAGAAAG
miRNA*
TTCTAGCCATTGCTTATATTCA
mismatches:
0
bulges:
1
View larger
pre-miRNA
ATACTCCCTCCGTCTCATAATGTAAGACT
TTCTAGCCATTGCTTATATTCA
TTAACATCTATATG
AATGTGGGCAATGCTAGAAAG
ACTTGTATTATGAA
ACGGAGGAAGTA
dot-bracket secondary structure
.((((.(((((((.((((((((((((.((
(((((((.((((((((((((((
(..........)))
)))))))))))))))))))))
.)))))))))))).
))))))).))))
SIMILARITIES
miRBase
osa-MIR819c
:
4e-22
PMRD
osa-miR819c
:
4e-22
microPC
miR1436
:
7e-24
UniProt
no hits
RFAM
MIR1122: 2e-33
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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