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ABOUT THIS RECORD

ID: MNEST004107
species: Oryza sativa
miRNA family: MIR1120
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ACTCCCTCCGTCCCATAATAT

miRNA*
 ATTATAGGACGGAGGGATTAG

mismatches: 2
bulges: 0
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pre-miRNA
 GGTAGATAACTACTCCCTCCGTCCCATAATATAAGGGATTTTGAGTTTTTACTTGCAACATTTGACCACTCGTCTTATTTAAATTTTTTTAAAATTATTA
TTTATTTTTTATTATATACAGTACTTTAAGCATAACTTTTTATTTTTTATATTTATAAAAAAATTAAATAAGACGAGTGATCAACGATACAACCAAAACT
CAAATTCCTTATATTATAGGACGGAGGGATTAGATTTCAGC

dot-bracket secondary structure
....((...(((.(((((((((((.((((((((((((((((.(((((((...(((......((((.((((((((((((((((.((((((.((((.((...
..)).))))((..(((((.((......(((.....)))......)).))))).)).)))))).)))))))))))))))).)))).....)))..))))))
))))))))))))))))).))))))))))).)))...))...


SIMILARITIES
miRBase osa-MIR818e: 0.0000000000002

PMRD osa-miR818e: 0.0000000000002

microPC miR818: 0.00000000005		UniProt no hits

RFAM MIR806: 5e-24		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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