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ABOUT THIS RECORD
ID:
MNEST004115
species:
Oryza sativa
miRNA family:
MIRf89
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ACCAACCGGGACTAAAGATCA
miRNA*
ATCTTTAGTCCCGGTTGGTAA
mismatches:
0
bulges:
0
View larger
pre-miRNA
TCGGGCATATTTG
ATCTTTAGTCCCGGTTGGTAA
C
ACCAACCGGGACTAAAGATCA
TCTTCAGCCC
dot-bracket secondary structure
..((((.....((
(((((((((((((((((((..
.
)))))))))))))))))))))
......))))
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf11271-akr
:
9e-25
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record