miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST004327
species:
Oryza sativa
miRNA family:
MIRf10
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTAGGCTTAAAAGATTCGTCT
miRNA*
ACGAATCTTTTGAGTCTAATT
mismatches:
0
bulges:
0
View larger
pre-miRNA
ATAAATCGCGAG
ACGAATCTTTTGAGTCTAATT
AGGCCATGATTAACTATAAGTGCTACAATAACTTACATGTGCTAATGACAGATTGA
TTAGGCTTAAA
AGATTCGTCT
CGTGGTTTT
dot-bracket secondary structure
..((((((((((
(((((((((((((((((((((
((..(((.....((..(((((.........)))))...))....))).....))))
)))))))))))
))))))))))
)))))))).
SIMILARITIES
miRBase
osa-MIR445h
:
0.00000000002
PMRD
osa-miRf11785-akr
:
1e-28
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record