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ABOUT THIS RECORD

ID: MNEST004357
species: Oryza sativa
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTACTCTCTCCGTCCCATAAT

miRNA*
 TATGGGACGGAGGGAGTAAAT

mismatches: 0
bulges: 0
View larger
pre-miRNA
 TTTGATGAATATTACTCTCTCCGTCCCATAATATAAGGGATTTTGAGTTTTGCTTGTAAGTGTTTGACCACTCGTCTTATTCAAATAATTTATGCAAATA
TAAAAAACGAAAAGTTATGTGTAAAGTATTTTTGGNATAATAAAGTAAGTCACAAAAAAGTAAATAATGATTCCAATTTTTTTTAATAAGACGAGTGGTC
AAACCGTATAAGTAAAAACTCAAAATCACTTATATTATGGGACGGAGGGAGTAAATACCAAGAT

dot-bracket secondary structure
...........((((((((((((((((((((((((((.((((((((((((((((((((...((((((((((((((((((((.(((((.((((((((....
.................)))))))).))))).(((..((......))..))).((((((((..............)))))))).))))))))))))))))
))))..))))))).))))))))))))).))))))))))))))))))))))))))..........


SIMILARITIES
miRBase osa-MIR818e: 0.000000000000004

PMRD osa-miR818e: 0.000000000000004

microPC miR818: 0.000000004		UniProt no hits

RFAM MIR806: 2e-29		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
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