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ABOUT THIS RECORD
ID:
MNEST004364
species:
Oryza sativa
miRNA family:
miR167g
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGTCATGCTGTAGTTTCATCT
miRNA*
GTGAAGCTGCCAGCATGATCTG
mismatches:
1
bulges:
1
View larger
pre-miRNA
CACAAGTTG
GTGAAGCTGCCAGCATGATCTG
ATGATGATGATGATCCACCTCTCTCATCTGTGTTCTTGATTAATTACGGATCAATCGATCA
GGTCATGC
TGTAGTTTCATCT
GCTGGT
dot-bracket secondary structure
.((.(((.(
((((((((((.(((((((((((
((((((..(((((..........)))))..)))).((((((.......))))))...))))
))))))))
)))))))))))).
))).))
SIMILARITIES
miRBase
osa-MIR167h
:
2e-36
PMRD
osa-miR167h
:
2e-36
microPC
miR167
:
5e-31
UniProt
no hits
RFAM
MIR167_1: 4e-35
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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