ABOUT THIS RECORDspecies: Oryza sativa
miRNA family: miR167g
source: miRNEST
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGTCATGCTGTAGTTTCATCT miRNA* GTGAAGCTGCCAGCATGATCTG mismatches: 1 bulges: 1 |
pre-miRNA
CACAAGTTGGTGAAGCTGCCAGCATGATCTGATGATGATGATGATCCACCTCTCTCATCTGTGTTCTTGATTAATTACGGATCAATCGATCAGGTCATGC
TGTAGTTTCATCTGCTGGT
dot-bracket secondary structure
.((.(((.(((((((((((.(((((((((((((((((..(((((..........)))))..)))).((((((.......))))))...))))))))))))
)))))))))))).))).))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
CACAAGTTGGTGAAGCTGCCAGCATGATCTGATGATGATGATGATCCACCTCTCTCATCTGTGTTCTTGATTAATTACGGATCAATCGATCAGGTCATGC
TGTAGTTTCATCTGCTGGT
dot-bracket secondary structure
.((.(((.(((((((((((.(((((((((((((((((..(((((..........)))))..)))).((((((.......))))))...))))))))))))
)))))))))))).))).))
SIMILARITIES| miRBase osa-MIR167h: 2e-36 PMRD osa-miR167h: 2e-36 microPC miR167: 5e-31 | UniProt no hits RFAM MIR167_1: 4e-35 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
