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ABOUT THIS RECORD
ID:
MNEST004372
species:
Oryza sativa
miRNA family:
MIR167
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAAGCTGGCAGCATGATCTG
miRNA*
GGTCATGCTGTAGTTTCATC
mismatches:
0
bulges:
1
View larger
pre-miRNA
TAACTAAGGGCAGGGGTGCACCACAAGTGGG
TGAAGCTGGCAGCATGATCTG
ATGATGATGATGATCCACCTCTCTCATCTGTGTTCTTGATTAATTACG
GATCAATCGATCA
GGTCATGCTGTAGTTTCATC
TGCTGGTTGGGAGCACAGCAAAAAAAAA
dot-bracket secondary structure
.........((....((((.(((..((((((
((((((((.((((((((((((
((((((..(((((..........)))))..)))).((((((.......
))))))...))))
))))))))))))))))))))
))))...)))..)))).)).........
SIMILARITIES
miRBase
osa-MIR167h
:
7e-37
PMRD
osa-miR167h
:
7e-37
microPC
miR167
:
7e-31
UniProt
no hits
RFAM
MIR167_1: 9e-37
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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