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ABOUT THIS RECORD

ID: MNEST004374
species: Oryza sativa
miRNA family: MIR806
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATGTGCTAAAAAGTCAACGGT

miRNA*
 CGTTGACATTTTAAGCACATGT

mismatches: 1
bulges: 1
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pre-miRNA
 CTACTATAATACTCCCTCCGTTTCGAAATGTTTGACGCCGTTGACATTTTAAGCACATGTTTGACCGTTCGTCTTATTCAAAAAATTTAAGTAATTATTA
ATTCTTTTCCTATCATTTGATTCATTGTTAAATATATTTTCATGCAGGCATATAATTTTACATATTTCACAAAAGTTTTTGAATAAGATGAACGGTTAAA
TATGTGCTAAAAAGTCAACGGTGTCAAACATTTCGAAACGGAGGGAGTACCATTGTA

dot-bracket secondary structure
.........((((((((((((((((((((((((((((((((((((.((((.(((((((((((((((((((((((((((((((((.((.(((.((((...)
)))))).....(((....)))...((((.((((((..........................)))))).)))))).)))))))))))))))))))))))))
)))))))).))))))))))))))))))))))))))))))))))))))))........


SIMILARITIES
miRBase osa-MIR806h: 1e-101

PMRD osa-miR806h: 1e-101

microPC miR806: 5e-104		UniProt no hits

RFAM MIR806: 4e-108		most similar mature miRNAs

Identical with: miR806 from microPC (MNEST046603)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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