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ABOUT THIS RECORD

ID: MNEST004384
species: Oryza sativa
miRNA family: MIR806
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATGTACTAAAAAGTCAACGGT

miRNA*
 CATTGACTTTTTAGCACATGT

mismatches: 2
bulges: 0
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pre-miRNA
 TGAGAAATGTACTCTCTCCATTTTAAAATGTTTGACACCATTGACTTTTTAGCACATGTTTGACCGTTCGTCTTATTCAAAAAATTTTGTGAAATATGTA
AAACTATATGTGTACACAAAAGTATATTTAACAATGAATCAAATGATATGAAAAGAATAAATAATTACTTAAATTTTTTAAATAAGATGAATGGTCAAAC
ATGTACTAAAAAGTCAACGGTGTCAAACATTTTGAAACGGAGGGAGTATTTTACCA

dot-bracket secondary structure
.....((.(((((((((((.(((((((((((((((((((.((((((((((((.((((((((((((((((((((((((.(((((((((((((..(((((((
....)))))))...)))).(((((((((((....((.(((....))).)).......))))))..)))))))))))))).))))))))))))))))))))
)))).)))))))))))).))))))))))))))))))).))))))))))).))....


SIMILARITIES
miRBase osa-MIR806c: 6e-94

PMRD osa-miR806c: 6e-94

microPC miR806: 1e-52		UniProt no hits

RFAM MIR806: 3e-90		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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