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ABOUT THIS RECORD
ID:
MNEST004389
species:
Oryza sativa
miRNA family:
MIR2123
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAAAAAGTCAACGGCGTCAGA
miRNA*
TGACACCGTTGACTTTTTAAC
mismatches:
1
bulges:
0
View larger
pre-miRNA
CAAACTATATGTCACTAGCTATATACCCCCTCCGTTTCAGAATGTT
TGACACCGTTGACTTTTTAAC
ACATGTTTAACCGTTCGTCTTGTTCAAAAACTT
TTGTGAAATATGTAAAATTATATGCCTACATAAAAATATATTTAGCAATGAATCAAATGATAGAAAAAGAATTAATAATTACTTAAATTCTTTCGAATAA
GACGAACGGTCAAACCATGTGC
TAAAAAGTCAACGGCGTCAGA
CATTTCGAAACGGAGTGAGTATCAATTCGTGAGTGCAATTAAC
dot-bracket secondary structure
.........((.((((.((.((((((...(((((((((.(((((((
((((.((((((((((((((.(
((((((((.((((((((((((((((........
((((.((((((((....((.((((....)))).)))))))))).))))...(((....)))....((((((((............)))))))).))))))
)))))))))).))).)))))).
)))))))))))))).))))))
))))).)))))))))...))))..))..)).))))))......
SIMILARITIES
miRBase
osa-MIR806h
:
7e-88
PMRD
osa-miR806h
:
7e-88
microPC
miR806
:
5e-67
UniProt
no hits
RFAM
MIR806: 8e-88
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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