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ABOUT THIS RECORD
ID:
MNEST004393
species:
Oryza sativa
miRNA family:
MIR2123
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAAAAAGTCAACGGTGTTAAA
miRNA*
TGACATTGTTAACTTTTTAGT
mismatches:
1
bulges:
0
View larger
pre-miRNA
TTTAGCTAATACTCCCTCCGTTTCAAAATATT
TGACATTGTTAACTTTTTAGT
ACGTGTTTGACCATTTGTCTTATTCAAAAAATTAAAGTAATTGTTTA
TTCTTTTTATATCATTTGATTTATTATTAAATATACTTTCATATATATATATATATATAGTTTTACATATTTCACAATTTTTTTTAATAAGATTAATGGT
TAAACATGTGC
TAAAAAGTCAACGGTGTTAAA
TATTTTGAAACGGAGGGAGTATTAATCTA
dot-bracket secondary structure
......((((((((((((((((((((((((((
((((((((((.((((((((((
(((((((((((((((.((((((((.((((((..((((((..((((((
.......((.(((....))).))....)))))))))))).(((((((....))))))).((............))...)))))).)))))))).))))))
)))))))))))
)))))))).))))))))))))
)))))))))))))))))))))))).....
SIMILARITIES
miRBase
osa-MIR806c
:
4e-24
PMRD
osa-miR806c
:
4e-24
microPC
miR806
:
0.0000000009
UniProt
no hits
RFAM
MIR806: 3e-28
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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